Jonas KOKO : Associate Professor in Applied Mathematics



Journal articles Proceedings papers Books & book chapters

Journal articles

  • A. Chorfi, J. Koko and O. Bodart, A fictitious domain decomposition method for a nonlinear bonded structure, Mathematics and Computers in Simulation (to appear)
  • F. Andzembe and J. Koko, Nesterov domain decomposition method for elliptic partial differential equations, Parallel Processing Letters 30, No 1, 2050004 (2020).
  • A. Chorfi and J. Koko, Alternating direction method of multiplier for unilateral contact problem with automatic penalty parameter selection, Applied Mathematical Modelling 78, 706-723, 2020.
  • N. Wagner, V. Antoine,  M.-M. Mialon, R. Lardy,  M. Silberberg, J. Koko and I. Vessier, Machine learning to detect behavioural anaomalies in dairy cows under subacute ruminal acidosis, Computers and Electronics in Agriculture 170, 105233 (2020).
  • J. Koko, Efficient MATLAB codes for 2D/3D Stokes equation with the mini-element, Informatica 30, 243-268, 2019.
  • J. Djoko, J. Koko and R. Kucera,  Power law Stokes equation with threshold slip boundary conditions: Numerical methods and implementation, Mathematical Methods in Applied Sciences 42, 1488-1511, 2019.
  • B. Leye, S. Kane, J. Koko and M. Sy, Numerical simulation of saltwater intrusion in coastal aquifers with anisotropic mesh adaptation,  Mathematics and Computers in Simulation 154, 1-18, 2018.
  • E.-H. Essoufi, J. Koko and A. Zafrar, Alternating direction method of multiplier for a unilateral contact problem in electroelastostatics, Computers and Mathematics with Applications 73, 1789-1802, 2017.
  • A.Lenoir, Ph. Mahey and J. Koko, Decompposition method for a spatial model for long-term energy pricing problem, Mathematical Methods of Operations Research 85,  137-153, 2017.
  •  E.M. Abou-ou-Cherif, E. Piron, A. Chateauneuf, D. Miclet, R. Lenain and J. Koko, On-the-field simulation of fertilizer spreading: Part 2 - Uniform investigation, Computers and Electronics in Agriculture 141, 116-130, 2017
  •   E.M. Abou-ou-Cherif, E. Piron, A. Chateauneuf, D. Miclet, R. Lenain and J. Koko, On-the-field simulation of fertilizer spreading: Part 1 - Modelling, Computers and Electronics in Agriculture 142, 235-247, 2017
  • J. Koko, Fast MATLAB assembly of FEM matrices in 2D and 3D using cell-array approach, International Journal of Modeling, Simulation and Scientific Computing 7, No. 2, 1650010 (2016).
  • F. Andzembe and J. Koko, Parallel nesterov's method for large-scale minimization of partially separable functions, Optimization Letters 11, 571-581, 2017.
  • J. Djoko and J. Koko, Numerical methods for the Stokes and Navier-Stokes equations driven by threshold slip boundary conditions, Computer Methods in Applied Mechanics and Engineering 305, 936-958, 2016.
  • O. Bodart, V. Cayol, S. Court and J. Koko, XFEM-based fictitious domain method for linear elasticity with crack, SIAM Journal Scientific Computing 38, 219-246 (2016).
  • E.-L. Essoufi, R. Fakhar and J. Koko, A decomposition method for a unilateral contact problem with Tresca friction arising in electro-elastostatics, Numerical Functional Analysis and Optimization 36, 1533-1558 (2015).
  • F. Guillen-Gonzalez and J. Koko, A splitting in time scheme and augmented Lagrangian method for a nematic liquid crystal problem, Journal of Scientific Computing 65, 1129-1144 (2015).
  • J. Koko, A MATLAB mesh generator for the two-dimensional finite element method, Applied Mathematics and Computation 250, 650-664 (2015).
  • J. Koko, Survey on dual decomposition methods, SeMA Journal 62, 27-60 (2013).
  • J. Koko, Parallel Uzawa method for large-scale minimization of partially separable functions, Journal of Optimization Theory and Applications 158, 127-187 (2013).
  • R. Helfenstein and J. Koko, Parallel preconditioned conjugate gradient on GPU, Journal of Computational and Applied Mathematics 236, 3584-3590 (2012).
  • J. Koko, Uzawa block relaxation method for a unilateral contact problem, Journal of Computational and Applied Mathematics 235, 2343-2356 (2011)
  • J. Koko and S. Jehan-Besson, An augmented Lagrangian method for TVg+L1-norm minimization, Journal Mathematical Imaging and Vision 38, 182-196 (2010).
  • J. Koko, Uzawa Block Relaxation Domain Decomposition Method for a Two-Body Frictionless Contact Problem, Applied Mathematics Letters 22, 1534-1538 (2009).
  • J. Koko and T. Virin, Optimization of a Fertilizer Spreading Process, Mathematics and Computers in Simulation 79; 3099-3109 (2009).
  • J. Koko, Uzawa block relaxation domain decomposition method for the two-body contact problem with Tresca friction, Computer Methods in Applied Mechanics and Engineering, 198 (2008), 420-431.
  • T. Virin, J. Koko, E. Piron, P. Martinet and Berducat M., Optimization-based approach for a better centrifugal spreading, International Journal of Systems Science, 39 (2008), 913-924.
  • J. Koko, Convergence analysis of optimization-based domain decomposition methods for a bonded structure, Applied Numerical Mathematics, 58 (2008), 69-87.
  • J. Koko, Vectorized Matlab codes for linear two-dimensional elasticity, Scientific Programming, 15 (2007), 157-172.
  •  J. Koko, Lagrange multiplier based decomposition methods for a nonlinear sedimentary basin problem, Computational Geosciences, 11 (2007), 307-317.
  •  J. Koko, A Lagrange multiplier decomposition method for a nonlinear sedimentary basin problem, Mathematical and Computer Modelling, 45 (2007), 440-448.
  •  J. Koko and D. Bresch, Operator-splitting and Lagrange multiplier domain decomposition methods for numerical simulation of two coupled Navier-Stokes fluids, International Journal of  Applied Mathematics and Computer Science, 16 (2006), 419-431.
  • J. Koko, Uzawa conjugate gradient domain decomposition methods for two coupled Stokes flows, Journal of Scientific Computing, 26 (2006), 195-215.
  • D. Bresch and J. Koko, An optimization-based domain decomposition method for nonlinear wall laws in coupled systems, Mathematical Models and Methods in Applied Sciences, 14  (2004), 1085-1101.
  • J. Koko, Newton's iteration with a conjugate gradient based decomposition method for an elliptic PDE with a nonlinear boundary condition, International Journal of  Applied Mathematics and Computer Science, 14 (2004), 13-18.
  • J. Koko, An optimization based domain decomposition method for a two-body contact problem, Numerical Functional Analysis and Optimization, 24 (2003), 587-605.
  • J. Koko, An optimization based domain decomposition method for a bonded structure, Mathematical Models and Methods in Applied Sciences, 12 (2002), 857-870.
  • P. Béal, J. Koko and R. Touzani, Mesh r-adaptation for unilateral contact problems, International Journal of  Applied Mathematics and Computer Science, 12 (2002), 101-108.
  • J. Koko, Modeling of textile composites with warp/weft frictional contact, Journal of Engineering Mathematics, 38 (2000), 297-308.
  • J. Koko, A conjugate gradient method with a quasi-Newton approximation, Applicationes Mathematicae, 27 (2000), 153-165.
  • F. Bendali, J. Koko and A. Quilliot, The draping of fabrics over arbitrary surfaces: an augmented Lagrangian method, Journal of the Textile Institute, 90 (1999), 177-186.
  • J. Koko and A. Moukrim, Parallel implementation of a generalized conjugate gradient algorithm, Informatica, 9 (1998), 437-448.
  • J. Koko, Semi-analytical solutions for an orthotropic cylindrical shell problem with prescribed radius, European Journal of Mechanics A/Solids, 17 (1998), 865-879.
  • J. Koko, An orthotropic cylindrical shell problem with prescribed radius, Mathematical Engineering in Industry, 7 (1998), 57-70.
  • F. Bendali, J. Koko and A. Quilliot, Génération de surfaces 3D par pliage de surfaces planes rectangulaires, RAIRO-APII Journal Européen de Systèmes Automatisés, 31 (1997) 807-830.
  • J. Koko and A. Quilliot, Habillage de surfaces de révolution, RAIRO-Modélisation Mathématique et Analyse Numérique, 29 (1995), 765-778.

Proceedings papers

  • N. Wagner, V. Antoine, J. Koko and R. Lardy, Fyzzy-k-NN based classifiers for time series with soft labels, Communication in Computer and Information Science 1239, M.-J. Lesot, S.M. Vieira, M.Z. Reformat, J.P. carbalho, A. Wilbik, R. Bouchon-Meunier, R.R. Yager (Eds), 578-589, Springer, 2020.
  • N. Wagner, V. Antoine, J. Koko, M.-M. Mialon, R. Lardy and I. veissier, Comparison of machine learning methods to detect anomalies in the activity of dairy cows, Lecture Notes in Computer Science 12117, D. Helic, G. Leitner, M. Stettinger, A. Felfernig, Z.W. Ras (Eds), 342-351, Springer, 2020.
  • O. Bodart, V. Cayol, F. Dabaghi and J. Koko, Fictitious domain decomposition method for an inverse problem in volcano, Lecture Notes in Computational Sciences and Engineering 138, R. haynes, S. MaclLachlan, X.-C. Cai, L. Halpern, H.H. Kim, A. Klawonn, O.Widlund (Eds), 409-416, Springer, 2020.
  • O. Bodart, A. Chrofi and J. Koko, A dmoain decomposition method for a geological crack problem, Lecture Notes in Computational Sciences and Engineering 138, R. haynes, S. MaclLachlan, X.-C. Cai, L. Halpern, H.H. Kim, A. Klawonn, O.Widlund (Eds), 401-408, Springer, 2020.
  • M. Angeletti, J.-M. Bonny, F. Duriff and J. Koko, Parallel hierarchical agglomerative clustering of fMRI data, Lecture Notes in Computer Science 10777, Wyrzykowski R., Dogarra J.J., Deelman E. Karczewski K. (Eds), 265-275, Springer, 2018.
  • R. Kucera, V. Satek, J. Haslinger, F. Polchyly, J. Koko and T. Sassi, Numerical modelling of the Stokes flow with threshold slip boundary conditions, AIP Conf. Proc. 1863, 340007-1--340007-4, 2017.
  • O. Bodart, V. Cayol, S. Court and J. Koko, Fictitious domain method for fracture models in elasticity, The European Consortium for Methematics in Industry 22, Russo G., Capasso V., Romano V. (Eds), 575-585, Springer, 2016.
  • J. Koko and T. Sassi, Uzawa block relaxation method for a bonded structure, Lecture Notes in Computational Science and Engineering 104, Dickopf Th., Gander M.J., Halpern L, Krause R., Pavarino L.F. (Eds), 551-558, Springer 2016.
  • F. Andzembe, J. Koko and T. Sassi, Domain decomposition with nesterov's method, Lecture Notes in Computational Science and Engineering 98, pp. 947-954, Springer 2014
  • M.K. Gdoura, J. Koko and T. Sassi, Domain decomposition method for the Stokes problem with Tresca friction, Lecture Notes in Computational Science and Engineering 91, pp. 655-662, Springer 2013.
  • C. Loosli, F. Lecellier, S. Jehan-Besson and J. Koko, A color-based selective and interactive filter using wieghted total variation, Lecture Notes in Computer Science 8048, pp. 315-323, Springer 2013.
  • C. Loosli, S. jehan-Besson and J. Koko, Uzawa block relaxation methods for color image restoration, Lecture Notes in Computer Science 7584, pp. 492-503, Springer 2012.
  • J. Koko and T. Sassi, Uzawa domain decomposition methods for the Stokes problem,  Lecture Notes in Computational Science and Engineering 78, pp. 383-390, Springer 2011.
  • S. Jehan-Besson and J. Koko, Fast dual minimization of weighted TV+L1-norm for salt and pepper noise removal, VISAPP (1), 68-75 (2010).
  • M. Ayadi, M.K. Gdoura et T. Sassi, MEF mixte pour la résolution du problème de Stokes avec des conditions aux limites de type Tresca (8 pages, CD Rom), CMSM3, Hammamet (2009).
  • J. Koko, Décomposition par dualisation d'un problème non linéaire de bassin sédimentaire, ESAIM: Proceedings 20, pp. 149-156 (2007).
  •  T. Virin, J. Koko, E. Piron, Ph. Martinet and M. Berducat, Spatial optimization of fertilizer application by centrifugal spreading,  STIC et Environnement 2006, Narbonne, France (2006), pp. 258-265.
  •   T. Virin, J. Koko, E. Piron, Ph. Martinet and M. Berducat, Application of Optimization Techniques for an Optimal Fertilization by Centrifugal Spreading. IROS 2006: 4399-4404
  • T. Virin, J. Koko, E. Piron and Ph. Martinet, On the use of optimization methods for the minimization of fertilizer application error with centrifugal spreader,  ICINCO 2006 3rd Intelligent Control Systems and Optimization, august 1-5, Setubal, Portugal (2006), pp. 124-129.
  • F. Guillen-Gonzalez and J. Koko, Numerical approximation for a liquid crystal model with splitting in time scheme and augmented Lagrangian method, Congresso de Ecuaciones Diferenciales y Aplicaciones (CEDYA'2005),  183-188 (2005).

Books and Book chapters

  • F. Andzembe and J. Koko, Parallel preconditioned conjugate gradient on GPU, Patterns for Parallel Programming on GPUs, Chap. 9, pp. 209-223, Computational Science, Engineering and Technology Series 34, F. Magoulès (Ed), Saxe-Coburg Publications, Kippen, UK (2014).
  • J. Koko, Approximation Numérique avec MATLAB, Ellpises TechnoSup, 312p (2014)
  • J. Koko, Calcul Scientifique avec MATLAB, Ellipses Technosup, 265p (2009).

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